Insertion junction: CLIP2.027889_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.027889
Chromosome:chromosome 10
Location:3925318
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g446650 HEL46,MER (1 of 1) K15271 - ATP-dependent DNA helicase HFM1/MER3 [EC:3.6.4.12] (HFM1, MER3); conserved protein with DEAD/DEAH box helicase domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAACGCCGCCATGGAGGGCGATCAGCGGGAGCTGGTGGAGGGGCTATTC
Internal bar code:GAGGCCGAACCGGTCCGTTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1746
LEAP-Seq percent confirming:57.8947
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CGCACCTCCTTCTGTGTCAT
Suggested primer 2:CCCAGCAAGAACGACTTCCT