Insertion junction: CLIP2.027894_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.027894
Chromosome:chromosome 11
Location:4343366
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g482700 (1 of 3) PF09011 - HMG-box domain (HMG_box_2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAAGCCGACCGCCCACACGGCCCCCCTCAAAACCAGCATTGCAACCCCA
Internal bar code:ACGAGGGAACCTAAGACGCACC

Confirmation - LEAP-Seq

LEAP-Seq distance:743
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:AGAGCACACAACCCCATAGC
Suggested primer 2:CACCGCATTGAAAGCCAACA