Insertion junction: CLIP2.027900_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.027900
Chromosome:chromosome 6
Location:1639338
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g261900 FAP71 (1 of 7) PF07004 - Sperm-tail PG-rich repeat (SHIPPO-rpt); Flagellar Associated Protein 71 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTCTGATGCAATTATGCCCATGCCTTTGATGTTTGCACCCGTTTTGCAG
Internal bar code:ATACGTGAAAACCGGTATGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2116
LEAP-Seq percent confirming:75.641
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:78

Suggested primers for confirmation by PCR

Suggested primer 1:GTATGTGCCTGTGCCTGAGT
Suggested primer 2:CACAATTCGCGCTAATCCCG