Insertion junction: CLIP2.027900_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.027900
Chromosome:chromosome 6
Location:1639344
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g261900 FAP71 (1 of 7) PF07004 - Sperm-tail PG-rich repeat (SHIPPO-rpt); Flagellar Associated Protein 71 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGAAAGTGTGCCCCGCCTGGCTCTACGCTAACGCCATTCCACCTGCCTC
Internal bar code:ATACGTGAAAACCGGTATGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:823
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CACAATTCGCGCTAATCCCG
Suggested primer 2:GTATGTGCCTGTGCCTGAGT