Insertion junction: CLIP2.027907_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.027907
Chromosome:chromosome 16
Location:1386844
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g652050 ZXE3 (1 of 1) PTHR13789//PTHR13789:SF234 - MONOOXYGENASE // SUBFAMILY NOT NAMED; Putative zeaxanthin epoxidase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCACCGTGACATGCCCGCGACTACGGTAGCCCCCCGCCCACCCAACCTC
Internal bar code:GAATCTTTATTACCGGCATACG

Confirmation - LEAP-Seq

LEAP-Seq distance:53
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:ACACATTGGTACACTCGCGT
Suggested primer 2:GTCAAAACACACCACGTCCG