Insertion junction: CLIP2.027914_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.027914
Chromosome:chromosome 8
Location:1677470
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g366101 (1 of 78) IPR002110//IPR020683 - Ankyrin repeat // Ankyrin repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGATCAGAGCGCCACGCCATGGGCACAAAGGCACACTCGGGGTTAACCCC
Internal bar code:CCATGACTACGTAGCCGGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1350
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GACAGGATATAGGGTGCGGC
Suggested primer 2:CTGTTTGTTCTTGGTGGCGG