Insertion junction: CLIP2.027924_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.027924
Chromosome:chromosome 1
Location:6075161
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g042950 (1 of 2) PF05255 - Uncharacterised protein family (UPF0220) (UPF0220) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTCGGGTCCGCGTGCTGCACGAACCCTACCCCTCACCGTAGTGCGCCA
Internal bar code:AGGCCGGCATTTCCAGCAGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1774
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTGGTGGAGATAGACCCC
Suggested primer 2:CAGTCCGACGTATGGCTACC