Insertion junction: CLIP2.027931_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.027931
Chromosome:chromosome 4
Location:3157551
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g226100 (1 of 752) IPR027417 - P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTATGTTTGCCACCAACCAACGTTTGCTGCTCCCATCTTGCTTGTCTGCG
Internal bar code:GGTCGGAAGCACCAAGGTTATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1023
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:TTTCCTCCACCGAATGCGAA
Suggested primer 2:TGCCCCTGCTGTATACTCCT