Insertion junction: CLIP2.027933_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.027933
Chromosome:chromosome 7
Location:2954089
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g332901 (1 of 80) IPR003882 - Pistil-specific extensin-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGAGTCTCAACGCGCTGGACGCAGGTGCTGGTGGGCATGGGCAACACCA
Internal bar code:ATTTAGTCCAAAGCTCTTCCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:504
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CATACACGGAGGACACCACC
Suggested primer 2:CACGCAGCACATACCGAATG