Insertion junction: CLIP2.027933_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.027933
Chromosome:chromosome 7
Location:2954098
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g332901 (1 of 80) IPR003882 - Pistil-specific extensin-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGACTCATGGGACCGAGCCTTGTGGTGCCACGTCCTCAGCGTCAAGAG
Internal bar code:ATTTAGTCCAAAGCTCTTCCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:861
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CACGCAGCACATACCGAATG
Suggested primer 2:CATACACGGAGGACACCACC