Insertion junction: CLIP2.027937_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.027937
Chromosome:chromosome 3
Location:4767625
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g177750 MAE10 (1 of 5) PTHR11206:SF94 - DNA-DAMAGE-INDUCIBLE PROTEIN F; related to EDS5, enhanced disease susceptibility gene CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGAGCTCCTAGGCGGCATGATGTCTTTCCTGGGGCCCGCCACACTCATT
Internal bar code:GCTACCTCAGCATATGGTGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:625
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CTGAGAGGGGAAGGGGGTTA
Suggested primer 2:GCTGCAGTCAAGTGGCTTTC