Insertion junction: CLIP2.027942_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.027942
Chromosome:chromosome 1
Location:2135244
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g800038 (1 of 3) IPR000953//IPR016197 - Chromo/chromo shadow domain // Chromo domain-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGGCTCGGTCGTTCACAGACGGTGCGTTCGCTACTGCTTGCAGGCACT
Internal bar code:CCAATTAAATTTGAACTTAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3417
LEAP-Seq percent confirming:83.7838
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:ACATCCTCGGCAAGTGTGAG
Suggested primer 2:ATCATGGACGAGGTGGAGGA