Insertion junction: CLIP2.027944_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.027944
Chromosome:chromosome 12
Location:41635
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g483550 VPE1 (1 of 1) K01369 - legumain (LGMN); Vacuolar processing enzyme CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGGGGGCTGAGGCGGGGCCTGGTCAGGCGCTTCTGACGGCCATGGCTC
Internal bar code:GCCTCAGCTGGAGGCCTTAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2816
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:GACGACCGACCCTGAAGTTT
Suggested primer 2:CCCAGTACTCCATCATCCGC