Insertion junction: CLIP2.027947_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.027947
Chromosome:chromosome 17
Location:2992644
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g719771 (1 of 4) PF12576 - Protein of unknown function (DUF3754) (DUF3754) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACACGGTCTTGGTGTTGCCTCCCGTGTGCTCTCTAACTTGCACATGCAA
Internal bar code:GTAAGATATAAGGCGTACTCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:155
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCAAAAGCAGCAGAAGCA
Suggested primer 2:CGCTTGCTGTAAATGGCCAG