Insertion junction: CLIP2.027947_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.027947
Chromosome:chromosome 17
Location:2992644
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g719771 (1 of 4) PF12576 - Protein of unknown function (DUF3754) (DUF3754) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCATGCCATGCTATGTGTGTGTGTACATTACCCCCGTGTTGGCCTGGC
Internal bar code:GGCCGACTGGGGTGTAAAAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:387
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTTGCTGTAAATGGCCAG
Suggested primer 2:CAGCAAAAGCAGCAGAAGCA