Insertion junction: CLIP2.027948_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.027948
Chromosome:chromosome 17
Location:3482320
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g723950 FAP397 Flagellar Associated Protein 397 with UDP-galactose 4-epimerase domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTAAAACCGAAACCCCGGCCAACCAAGTCTATCTCAATACCTACTCTTG
Internal bar code:AGACCAGTTATTTTAGTGCTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:4290
LEAP-Seq percent confirming:65.1515
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:66

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGGTGGCTGGGAGGACTA
Suggested primer 2:CCTCACCCACGATGAACACA