Insertion junction: CLIP2.027952_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.027952
Chromosome:chromosome 1
Location:3727256
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g024251 (1 of 1) PF00270//PF00271//PF04408 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // Helicase associated domain (HA2) (HA2) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGAGCCGCGGCGTGTGGCCGCCAAGGGCGCGGCGCGGCGCATGGCGGCC
Internal bar code:GGTAGAGAAGTGACCCCCACGC

Confirmation - LEAP-Seq

LEAP-Seq distance:4146
LEAP-Seq percent confirming:97.561
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTTCACACACTAGCTGCA
Suggested primer 2:CGTCTAGCATAGCTGGGTGG