Insertion junction: CLIP2.027952_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.027952
Chromosome:chromosome 1
Location:3727260
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g024251 (1 of 1) PF00270//PF00271//PF04408 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // Helicase associated domain (HA2) (HA2) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCGCCGGGTGGGGGGCATGGGCACCGAGGCCGGGTGGTCAGGCTTGAA
Internal bar code:GAATTGGTCGGGAGTGGCGTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:5488
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCTAGCATAGCTGGGTGG
Suggested primer 2:CCCTTCACACACTAGCTGCA