Insertion junction: CLIP2.027956_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.027956
Chromosome:chromosome 2
Location:7036529
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre09.g389838 (1 of 1) IPR000504//IPR002750//IPR012677 - RNA recognition motif domain // CobE/GbiG C-terminal domain // Nucleotide-binding alpha-beta plait domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGAGGCCCGCCACCTGTGGCTGGGCAATCTGCTGCCGACAACAACCGGC
Internal bar code:GACCGAGGACTAGAATTACAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:431
LEAP-Seq percent confirming:52.6316
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CCAAGCTGTGGTGAAACACG
Suggested primer 2:GTTTGACGACGGCGATGATG