Insertion junction: CLIP2.027957_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.027957
Chromosome:chromosome 8
Location:4244433
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g384200 (1 of 1) IPR000104//IPR003191//IPR009148//IPR015894//IPR027417//IPR030386 - Antifreeze protein, type I // Guanylate-binding protein, C-terminal // Streptococcal non-M secreted SibA // Guanylate-binding protein, N-terminal // P-loop containing nucleoside triphosphate hydrolase // GB1/RHD3-type guanine nucleotide-binding (G) domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGAGGCTGTAAAAGCTCAGGCAAGGACCAGATGTGAACCATACTGCGGC
Internal bar code:CTCTGTGGGTTTTATTCTATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:162
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CACCGCTACGTTTGTGTGTG
Suggested primer 2:GCCGAAACTGCTCTTATGCG