Insertion junction: CLIP2.027960_4

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.027960
Chromosome:chromosome 10
Location:3007620
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g440550 (1 of 14) PF13540 - Regulator of chromosome condensation (RCC1) repeat (RCC1_2) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACTACCTGGACCGGCTGACGGTGGCGGAGCAGGTGCCCTGGTGGTGGCC
Internal bar code:TGGGAGATAGTACGGGTGGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:438
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTAAATCCACCCACCCAC
Suggested primer 2:GGTTGTGGACTGGAGGATGG