Insertion junction: CLIP2.027970_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.027970
Chromosome:chromosome 12
Location:5898846
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g533550 PYK1 (1 of 1) PTHR11817:SF5 - PYRUVATE KINASE-RELATED; Pyruvate kinase 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCGGCAGGTTCACGTTCTTGCGCTCGCTGCACGGGCACAGGGCGAGGG
Internal bar code:GGCCCTCAGTTTGGCCGGGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1411
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTTACTCAGGGGTGGGTG
Suggested primer 2:TTCTCGGTGGGGATCTCCAT