Insertion junction: CLIP2.027975_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.027975
Chromosome:chromosome 6
Location:3702031
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278154 (1 of 1) PTHR31560:SF0 - UPF0652 PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGACAAGTCCGCACAGCCGGCACGTGTGGCGGACATGTCAGGCCCTGAGC
Internal bar code:TGGTTCCAGGGTGCCAATACGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2298
LEAP-Seq percent confirming:97.9167
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGGTCCGTAGCTAGCATG
Suggested primer 2:AAGCAGAGCATCGATACGGG