Insertion junction: CLIP2.027980_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.027980
Chromosome:chromosome 1
Location:1986410
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g010880 (1 of 2) K18598 - echinoderm microtubule-associated protein-like 6 (EML6) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGACAACAAGCAACCAGGCGTGCAGATGAGCAAGTACAAGCATTGGAT
Internal bar code:GCGCATATAGATGACAAAGCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1341
LEAP-Seq percent confirming:40.9091
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:TACAAGGTGGTGAGCACGAC
Suggested primer 2:TCCACCCTTATCAGCCCTCA