Insertion junction: CLIP2.027994_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.027994
Chromosome:chromosome 3
Location:2494186
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g159350 (1 of 1) IPR001680//IPR011044//IPR011047//IPR015943//IPR017986//IPR027417 - WD40 repeat // Quinoprotein amine dehydrogenase, beta chain-like // Quinonprotein alcohol dehydrogenase-like superfamily // WD40/YVTN repeat-like-containing domain // WD40-repeat-containing domain // P-loop containing nucleoside triphosphate hydrolase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCTCCGCAGCAGTGCCTCCACCACCTCCTCGGCGCCGTGCAGCCAGGCG
Internal bar code:ACTAACATATTCGCGAAAGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:480
LEAP-Seq percent confirming:16.129
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:26
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:CTTTGACTGGCTGTGGGACT
Suggested primer 2:TCGGGACTCAGCACAAACTC