Insertion junction: CLIP2.027995_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.027995
Chromosome:chromosome 6
Location:321688
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g800592 (1 of 1) PF05551 - Zinc-binding loop region of homing endonuclease (zf-His_Me_endon) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCCCACCTTTGCCCGCCGCTGTCCTCCGCCAGCGGCCAGCCCCCCTCG
Internal bar code:AACGCAGGTCTGATGCGGGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1864
LEAP-Seq percent confirming:95.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGGAGAGCGACTCGGTTC
Suggested primer 2:TGTACTAGGATGGCTGGGCT