Insertion junction: CLIP2.027999_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.027999
Chromosome:chromosome 2
Location:607804
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g077451 (1 of 1) IPR000073//IPR000868//IPR029058 - Alpha/beta hydrolase fold-1 // Isochorismatase-like // Alpha/Beta hydrolase fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTCCATCTCACGAACCACAATGGAGCGGACGGCTCTCGCTGGCAACCC
Internal bar code:AAGTCTTTAGTCTGCAACCCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:4087
LEAP-Seq percent confirming:97.2727
LEAP-Seq n confirming:107
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:110

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCTGTCGTCTGGTGTGAG
Suggested primer 2:ACACGTCAATGGGGTCAGTC