Insertion junction: CLIP2.027999_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.027999
Chromosome:chromosome 2
Location:607808
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g077451 (1 of 1) IPR000073//IPR000868//IPR029058 - Alpha/beta hydrolase fold-1 // Isochorismatase-like // Alpha/Beta hydrolase fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGTGTTGCCCGTTGTTTCCCGTAATCCGCGGTGTGCATGTCTTCGGTTG
Internal bar code:TCTTCTAGTATATCTTCTTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3177
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:ACACGTCAATGGGGTCAGTC
Suggested primer 2:AAGCTGTCGTCTGGTGTGAG