Insertion junction: CLIP2.028004_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.028004
Chromosome:chromosome 11
Location:3994601
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g801331 (1 of 80) IPR003882 - Pistil-specific extensin-like protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGCCCCTGCCCCCAAGCCCGCCACCGCCAATCCCTGCACCTCCCAGCC
Internal bar code:GGCTAACGCACAATGGGCATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1674
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:GGGCATCGGTGAGGCTATAC
Suggested primer 2:TCCACCTCAGCCTCCTTCC