Insertion junction: CLIP2.028009_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.028009
Chromosome:chromosome 14
Location:1478176
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g617400 HSP22F Heat shock protein 22F; (1 of 4) PTHR11527//PTHR11527:SF128 - SMALL HEAT-SHOCK PROTEIN HSP20 FAMILY // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGAAGGTCGGACCGGCAGCATCGACCGCATGGCGATGGCGCGAGCGCCGG
Internal bar code:GTTCTCTCGGTGAGACCTTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1756
LEAP-Seq percent confirming:96.8254
LEAP-Seq n confirming:61
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:63

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGGCTTGAGCAAGGTGTG
Suggested primer 2:GAAGGAAAACCCGTTCGCAC