Insertion junction: CLIP2.028017_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.028017
Chromosome:chromosome 3
Location:411743
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g144847 PYK4 (1 of 2) PTHR11817//PTHR11817:SF3 - PYRUVATE KINASE // PYRUVATE KINASE; Pyruvate kinase 4 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCACCTGTCCACCATGCTATACATGATCTGCGCGCTGACGATGCACGGC
Internal bar code:CGACTTTGCGTAAGTGGTGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1594
LEAP-Seq percent confirming:86.3636
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GACTTCGTGAGCATCCCCAA
Suggested primer 2:GGGTTGAACATACCTGGCCA