Insertion junction: CLIP2.028018_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.028018
Chromosome:chromosome 9
Location:4781023
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g402404 (1 of 1) IPR002048//IPR013761 - EF-hand domain // Sterile alpha motif/pointed domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGCGAGGAAGCCGGTTTGTAGCTCTAGGGGCCAGCAGGGTCGCGGGAC
Internal bar code:TACGGTTAGCAGTGTCCGTAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2688
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:TGGACACCGGGTAGCTGATA
Suggested primer 2:CCCTCATGACGTACTCAGGC