Insertion junction: CLIP2.028019_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.028019
Chromosome:chromosome 10
Location:3831398
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g445850 MAE14 (1 of 11) K03327 - multidrug resistance protein, MATE family (TC.MATE, SLC47A, norM, mdtK, dinF); MATE efflux family protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTGGAGGTCAACCGCCAGTGCGTCCAGGCCGGCGAGCGCAACGCTCCA
Internal bar code:CTGCACAGAATAAACGACCTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2561
LEAP-Seq percent confirming:98.0392
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:TCTCTGCGCCAAAACCTGAT
Suggested primer 2:TCCGTTGACGTAGGGAGCTA