Insertion junction: CLIP2.028022_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.028022
Chromosome:chromosome 12
Location:5111823
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g801421 (1 of 726) IPR011009 - Protein kinase-like domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGGCTCGGCCAGCTCGGCAGCCCCTGCAGCCGCCAGCTCGCTGCATGC
Internal bar code:GACCAATTCTGTTGTCGAATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:6206
LEAP-Seq percent confirming:47.619
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:CACGCCAAACAGAGTTGTGG
Suggested primer 2:AAGCGCGCAGATTATTGCTG