Insertion junction: CLIP2.028032_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.028032
Chromosome:chromosome 2
Location:7229466
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g390986 TSD1 (1 of 1) PTHR22594//PTHR22594:SF5 - ASPARTYL/LYSYL-TRNA SYNTHETASE // ASPARTATE--TRNA LIGASE, MITOCHONDRIAL; Putative organellar aspartyl-tRNA synthetase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGGCGCCATGCACGCCGATCCCCGCCCCACCCACTCTCACTGTCCCCGG
Internal bar code:AACTTTCGGGTCAAGCTCGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:785
LEAP-Seq percent confirming:8.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:CGATTTCCGCCAGTCCCATA
Suggested primer 2:TGGCCTCAGATGCAGGAAAG