Insertion junction: CLIP2.028033_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.028033
Chromosome:chromosome 1
Location:3341156
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g021600 HEL1 (1 of 1) PTHR24031//PTHR24031:SF255//PTHR24031:SF274 - RNA HELICASE // DEAD-BOX ATP-DEPENDENT RNA HELICASE 40 // SUBFAMILY NOT NAMED; DEAD-box RNA helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACCTCATCCAGGATGTCCGGAGGGAACCCAACCGACTCAAACGTCTGCA
Internal bar code:TAGATATCACACATACGGCTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2521
LEAP-Seq percent confirming:95.3488
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTGTTTGACCCAACCAGT
Suggested primer 2:CTCCTGCACTCCGTAAAGCA