Insertion junction: CLIP2.028061_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.028061
Chromosome:chromosome 17
Location:2492592
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g715550 (1 of 100) IPR001810 - F-box domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGCCGTCCAGGGAGGCCATCACCTCCATAACCGTGCCGCGCAGCTCCC
Internal bar code:GCTAACATGGGAACAGGCCTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3008
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTCCTCTCCCCTACTGCT
Suggested primer 2:GCATGTCACAAGCTGGCAAA