Insertion junction: CLIP2.028067_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.028067
Chromosome:chromosome 3
Location:1175446
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g149350 RWP4 (1 of 16) PF02042 - RWP-RK domain (RWP-RK); RWP-RK transcription factor CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCGCCAGCGATCTGGCAGTGGGCGCCGCGGCTCACGGCGGCGGGGCGC
Internal bar code:CCACTTTTGAAGTGTGGTGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3816
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGACTGCTGTTGTCGGAA
Suggested primer 2:TGTCCCAGCAGCAACTACAG