Insertion junction: CLIP2.028070_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.028070
Chromosome:chromosome 4
Location:3751483
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g229450 (1 of 274) IPR020683 - Ankyrin repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCCGTCCGAGGGCCCGGCGCCCACCGCGGCGCCCAAGCCCGGCCCGGC
Internal bar code:AGTCGTCATGCTTGTCATCTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1457
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCAAAATACACGCGCATA
Suggested primer 2:CACGGTGAGTAAAGGGCAGT