Insertion junction: CLIP2.028088_4

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.028088
Chromosome:chromosome 12
Location:3962289
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g515500 (1 of 1) PF04780 - Protein of unknown function (DUF629) (DUF629) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTCCCGTTTTATCGCCTCGCAACGCGCCTCCGGCTGCAGCTGGTACCAT
Internal bar code:CCACAGTTTCTGTTGAGGTTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1079
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CAAACAGCTTTCTGCCCCAC
Suggested primer 2:ACCCACTCCACGATGTTGTC