Insertion junction: CLIP2.028098_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.028098
Chromosome:chromosome 2
Location:6523301
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g389000 (1 of 1) PTHR23012:SF61 - AT07234P-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACAACCTGGGGCAATCAATGGTGTGTGGGTGTGCGACAAGTGCGGCACG
Internal bar code:TTGGCAATGCAGGTTGGGTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:371
LEAP-Seq percent confirming:72.2222
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:ACGGCACACATACACACACA
Suggested primer 2:CAGTTGGTAGGTGACGGGTC