Insertion junction: CLIP2.028100_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.028100
Chromosome:chromosome 1
Location:4591922
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g031700 FKM1 DNA methylase in the FkbM family; (1 of 13) PF05050 - Methyltransferase FkbM domain (Methyltransf_21) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCCACTTAGGCCTTGCTTGTCCTAGATCACAACGCCACTTAGGCCTTGC
Internal bar code:ACGCATATACAATGATGGAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2725
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGTAGTTGTCCCCAGGTC
Suggested primer 2:GCATTAACTCAGGCATGCCG