Insertion junction: CLIP2.028102_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.028102
Chromosome:chromosome 2
Location:6357310
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g387850 RWP13 (1 of 16) PF02042 - RWP-RK domain (RWP-RK); RWP-RK transcription factor intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCACAGCCCATCGTTAAGGCAGGCGAGTGAATGCTGCAACTGGTGCGAG
Internal bar code:GAGAACAGGGGGTGGCTGTATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1948
LEAP-Seq percent confirming:69.2308
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGCAAGCATCCCTCTCTT
Suggested primer 2:CAGTCATGAGCGTGGGGATG