Insertion junction: CLIP2.028110_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.028110
Chromosome:chromosome 9
Location:886547
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g403400 (1 of 3) PF13637//PF13920 - Ankyrin repeats (many copies) (Ank_4) // Zinc finger, C3HC4 type (RING finger) (zf-C3HC4_3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTAGCTGCGCATAGACATGATCGTGCACACTGCTGCCACCCGCGGCAAC
Internal bar code:TTTCATGCCCTATTATTATGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1802
LEAP-Seq percent confirming:73.8095
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTGTTAGCATTGCGCATA
Suggested primer 2:GGCATACTCACCTGCACAGT