Insertion junction: CLIP2.028111_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.028111
Chromosome:chromosome 5
Location:953505
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g246900 (1 of 1) IPR008972//IPR028096 - Cupredoxin // EfeO-type cupredoxin-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAACTTTCCCAGACGCGGCAAATCCGTCAGCGCACACACAACTGATTG
Internal bar code:CTTGCTATGGCTGCAAGACATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2366
LEAP-Seq percent confirming:90.4762
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:ACATGTTTTCGCCAAGCACC
Suggested primer 2:TGGCACACCCAGACAAAACT