Insertion junction: CLIP2.028121_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.028121
Chromosome:chromosome 9
Location:5979590
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g412350 (1 of 1) PTHR16557:SF4 - 2-OXOGLUTARATE-DEPENDENT DIOXYGENASE FAMILY PROTEIN-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACAGAGTCCAAGAGCCCTCCAGCCACCAGCCATTCCGTTGATTTACCC
Internal bar code:GTGGTGTCTATTAAGACAGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1046
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCCTCCAAACCAGCAAAC
Suggested primer 2:GAGGGTTGGTGGGTATGTGG