Insertion junction: CLIP2.028128_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.028128
Chromosome:chromosome 17
Location:3957233
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g802076 (1 of 1) IPR000104//IPR026847 - Antifreeze protein, type I // Vacuolar protein sorting-associated protein 13 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGGGCGCCTTTGTGGCGATACGCGGCGGCGACAACCAGCCGCTCACGC
Internal bar code:GCGATGCAATGGGAGTTGGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1589
LEAP-Seq percent confirming:87.0968
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:TCGGCAGGTAATCAGGGGTA
Suggested primer 2:GGAAACAACAAGCTTGCCGT