Insertion junction: CLIP2.028135_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.028135
Chromosome:chromosome 12
Location:7503997
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g556700 (1 of 3) IPR000104//IPR011009 - Antifreeze protein, type I // Protein kinase-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTGAGAAGTGGTAAGTACGACAAGGTAGGCAGTGCACGGGCAGCGCCG
Internal bar code:CCTGCCCGACATATGACAGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:294
LEAP-Seq percent confirming:27.5
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:29
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGGTGATCAAGGCCGTAA
Suggested primer 2:AAGACCTTCTCCACCTTGCG