Insertion junction: CLIP2.028136_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.028136
Chromosome:chromosome 2
Location:2887010
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g094900 (1 of 1) PTHR23083//PTHR23083:SF427 - TETRATRICOPEPTIDE REPEAT PROTEIN, TPR // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGCCTGGACCCCACCGACCTGCTCAGCTACAGCCGCCGCGCGCACTGCT
Internal bar code:GCATCCAAGGTATCCGACATCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1915
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:ACCAAGCTTCTCAAGTGCGA
Suggested primer 2:CATTCCAACTTGCCGCCTTC