Insertion junction: CLIP2.028145_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.028145
Chromosome:chromosome 16
Location:2895118
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g663250 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCACAGGTCGGCGCTGCTCACCGCCACGCCGCACAACTACCTCCCGCT
Internal bar code:TCTGTTGTGCTATGTGGCAGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1942
LEAP-Seq percent confirming:57.1429
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCCCTGCATGCATCATTC
Suggested primer 2:CCGTGTTGCCGCAACTTTAA